EIYBrowse.importers.Interactions module¶

class EIYBrowse.importers.Interactions.HiCLoader(*args, **kwargs)¶

Bases: EIYBrowse.importers.Interactions.MatrixLoader

get_data(matrix_path)¶

class EIYBrowse.importers.Interactions.HiCWindows(db_con)¶

Bases: object

add_windows(data)¶

class EIYBrowse.importers.Interactions.MatrixLoader(matrix_paths, db_path, chrom_regex='chr[0-9X]{1, 2}', **kwargs)¶

Bases: object

add_matrices_to_db()¶

add_matrix_to_db(matrix_path)¶

get_chrom_string(matrix_path)¶

class EIYBrowse.importers.Interactions.NpzLoader(*args, **kwargs)¶

Bases: EIYBrowse.importers.Interactions.MatrixLoader

get_data(matrix_path)¶

EIYBrowse.importers.Interactions.chunker(n, iterable)¶